Generative protein design

Biotechnology & Synthetic BiologyUpdated Oct 5, 2026Version v1

Evidence

Public papers linked to this topic and used as evidence for gaps, timelines, and knowledge views.

149 papers

Showing 97-108 of total 149 evidence records.

Open a paper to inspect abstract, source links, and topic context.

2022CrossrefSupporting evidence22 citations

Jian Liu; Tianqi Wu; Zhiye Guo; Jie Hou; Jianlin Cheng

Jan 1, 2022Proteins: Structure, Function, and Bioinformatics

2021CrossrefSupporting evidence14 citations

Study of real-valued distance prediction for protein structure prediction with deep learning

Jin Li; Jinbo Xu

Oct 11, 2021Bioinformatics

2021OpenAlexSupporting evidence3,337 citations

Highly accurate protein structure prediction for the human proteome

Kathryn Tunyasuvunakool; Jonas Adler; Zachary Wu; Tim Green; Michał Zieliński; Augustin Žídek; Alex Bridgland; Andrew Cowie; Clemens Meyer; Agata Laydon; Sameer Velankar; Gerard J. Kleywegt; Alex Bateman; Richard Evans; Alexander Pritzel; Michael Figurnov; Olaf Ronneberger; Russ Bates; Simon Köhl; Anna Potapenko; Andrew J. Ballard; Bernardino Romera‐Paredes; Stanislav Nikolov; Rishub Jain; Ellen Clancy; David Reiman; Stig Petersen; Andrew Senior; Koray Kavukcuoglu; Ewan Birney; Pushmeet Kohli; John Jumper; Demis Hassabis

Jul 22, 2021Nature

2021OpenAlexSupporting evidence47K citations

Highly accurate protein structure prediction with AlphaFold

John Jumper; Richard Evans; Alexander Pritzel; Tim Green; Michael Figurnov; Olaf Ronneberger; Kathryn Tunyasuvunakool; Russ Bates; Augustin Žídek; Anna Potapenko; Alex Bridgland; Clemens Meyer; Simon Köhl; Andrew J. Ballard; Andrew Cowie; Bernardino Romera‐Paredes; Stanislav Nikolov; Rishub Jain; Jonas Adler; Trevor Back; Stig Petersen; David Reiman; Ellen Clancy; Michał Zieliński; Martin Steinegger; Michalina Pacholska; Tamas Berghammer; Sebastian W. Bodenstein; David Silver; Oriol Vinyals; Andrew Senior; Koray Kavukcuoglu; Pushmeet Kohli; Demis Hassabis

Jul 15, 2021Nature

2021OpenAlexSupporting evidence86 citations

De Novo Molecule Design Through the Molecular Generative Model Conditioned by 3D Information of Protein Binding Sites

Mingyuan Xu; Ting Ran; Hongming Chen

Jul 1, 2021Journal of Chemical Information and Modeling

2021CrossrefSupporting evidence14 citations

Protein structure search to support the development of protein structure prediction methods

Ronald Ayoub; Yugyung Lee

Jun 1, 2021Proteins: Structure, Function, and Bioinformatics

2021OpenAlexSupporting evidence964 citations

Structure-based protein function prediction using graph convolutional networks

Vladimir Gligorijević; P. Douglas Renfrew; Tomasz Kościółek; Julia Koehler Leman; Daniel Berenberg; Tommi Vatanen; Chris Chandler; Bryn C. Taylor; I. Fisk; Hera Vlamakis; Ramnik J. Xavier; Rob Knight; Kyunghyun Cho; Richard Bonneau

May 26, 2021Nature Communications

2021OpenAlexDirectly related149 citations

Protein sequence design with deep generative models

Zachary Wu; Kadina E. Johnston; Frances H. Arnold; Kevin K. Yang

May 26, 2021Current Opinion in Chemical Biology

2021OpenAlexDirectly related358 citations

Protein design and variant prediction using autoregressive generative models

Jung-Eun Shin; Adam J. Riesselman; Aaron W. Kollasch; Conor McMahon; Elana P. Simon; Chris Sander; Aashish Manglik; Andrew C. Kruse; Debora S. Marks

Apr 23, 2021Nature Communications

2021CrossrefDirectly related20 citations

Recent Progress Using De Novo Design to Study Protein Structure, Design and Binding Interactions

Juan Ferrando; Lee A. Solomon

Mar 10, 2021Life

2021CrossrefDirectly related13 citations

Computational design and experimental optimization of protein binders with prospects for biomedical applications

Alessandro Bonadio; Julia M Shifman

Feb 15, 2021Protein Engineering, Design and Selection

2021CrossrefDirectly related7 citations

Recent developments in engineering protein–protein interactions using phage display

Chen T Liang; Olivia M A Roscow; Wei Zhang