Generative protein design

Biotechnology & Synthetic BiologyUpdated Oct 5, 2026Version v1

Evidence

Public papers linked to this topic and used as evidence for gaps, timelines, and knowledge views.

149 papers

Showing 133-144 of total 149 evidence records.

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2015OpenAlexDirectly related421 citations

Computational protein design enables a novel one-carbon assimilation pathway

Justin B. Siegel; Amanda Lee Smith; Sean Poust; Adam J. Wargacki; Arren Bar‐Even; Catherine Louw; Betty Shen; Christopher B. Eiben; Huu M. Tran; Εlad Noor; Jasmine L. Gallaher; Jacob B. Bale; Yasuo Yoshikuni; Michael H. Gelb; Jay D. Keasling; Barry Stoddard; Mary E. Lidstrom; David Baker

Mar 9, 2015Proceedings of the National Academy of Sciences

2014OpenAlexDirectly related129 citations

Removing T-cell epitopes with computational protein design

Chris King; Esteban N. Garza; Ronit Mazor; Jonathan L. Linehan; Ira Pastan; Marion Pepper; David Baker

May 19, 2014Proceedings of the National Academy of Sciences

2012OpenAlexDirectly related45 citations

Computational Protein Engineering: Bridging the Gap between Rational Design and Laboratory Evolution

Alexandre Barrozo; Rok Borštnar; Gaël Marloie; Shina Caroline Lynn Kamerlin

Sep 28, 2012International Journal of Molecular Sciences

2012CrossrefDirectly related81 citations

Multistate approaches in computational protein design

James A. Davey; Roberto A. Chica

Sep 1, 2012Protein Science

2011CrossrefDirectly related13 citations

Survey of Protein Engineering Strategies

Uwe Bornscheuer; Romas J. Kazlauskas

Nov 1, 2011Current Protocols in Protein Science

2011OpenAlexDirectly related136 citations

Theoretical and Computational Protein Design

Ilan Samish; Christopher M. MacDermaid; Jose Manuel Perez‐Aguilar; Jeffery G. Saven

Mar 3, 2011Annual Review of Physical Chemistry

2008OpenAlexSupporting evidence5,281 citations

I-TASSER server for protein 3D structure prediction

Yang Zhang

Jan 23, 2008BMC Bioinformatics

2006OpenAlexSupporting evidence388 citations

Automated protein function prediction--the genomic challenge

Iddo Friedberg

May 23, 2006Briefings in Bioinformatics

2005OpenAlexDirectly related145 citations

Specificity versus stability in computational protein design

Daniel N. Bolon; Robert A. Grant; Tania A. Baker; Robert T. Sauer

Aug 29, 2005Proceedings of the National Academy of Sciences

2005OpenAlexSupporting evidence1,146 citations

Protein function prediction via graph kernels

Karsten Borgwardt; Cheng Soon Ong; Stefan Schönauer; S. V. N. Vishwanathan; Alexander J. Smola; H.-P. Kriegel

Jun 1, 2005Computer applications in the biosciences

2004OpenAlexSupporting evidence2,211 citations

Protein structure prediction and analysis using the Robetta server

David E. Kim; Dylan Chivian; David Baker

Jul 1, 2004Nucleic Acids Research

2001OpenAlexSupporting evidence1,619 citations

Protein Structure Prediction and Structural Genomics

David A. Baker; Andrej Šali

Oct 5, 2001Science