Single-Cell Genomics — Research Evidence and Topic Memory

Evidence

Public papers linked to this topic and used as evidence for gaps, timelines, and knowledge views.

88 papers

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Showing 1-12 of total 88 evidence records.

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2026arXivDirectly related

scMTNI: Leveraging cellular trajectory and context to infer dynamic GRNs from single-cell multi-omics data

Suvojit Hazra; Chandrani Kumari; Sushmita Roy

Jul 1, 2026

2026PubMedDirectly related

Airway cell-cell communication in smoking through integration of spatial and single-cell transcriptomics.

Morrow JD; El-Husseini ZW; Yun JH; Hersh CP

Jan 1, 2026Respiratory research

2026PubMedDirectly related

Single-cell transcriptomic analysis reveals endothelial mitochondrial dysfunction and synaptic impairment underlying arsenic-induced hippocampal neurotoxicity in mice.

Shao X; Cui J; Wang Y; Yang S; Ma X; Guan Z; Lv M; Zhang M; Gao Y; Liu X; Wang S; Zhang X; Liu P; Wang Q; Gao Y; Yang Y

Jan 1, 2026Ecotoxicology and environmental safety

2026PubMedDirectly related

A spatiotemporal single-cell transcriptomic atlas reveals fertilization-induced auxin signaling driving strawberry fruit set and development.

Ma Z; Zhang M; Tian G; Li W; Zhang Y; Liang X; Gao S; Zhao X; Zhu C; Guo Y; Kang C; Lian H; Xu P; Yu J; Liu T; Xiao W; Li L; Liu Z; Han X; Zhou J

Jan 1, 2026Nature communications

2026PubMedSupporting evidence

Heterogeneous mechanisms, risk stratification, and translational advances in the malignant transformation of oral potentially malignant disorders to oral squamous cell carcinoma.

Yu Z; Peng H; Cheng X; Xu W; Wang Y; Xiao Y; Wei T; Huang Z; He Y; Wang J

Jan 1, 2026Frontiers in molecular biosciences

2026PubMedSupporting evidence

Tumor cell-intrinsic stress states drive sensitivity to CAR T cell therapy in pancreatic cancer.

Fröse J; Chen E; Whittaker CA; Leclerc P; Doherty S; Langenbucher A; Shao J; Hellinger RD; Goulet D; Tammela T; Sánchez-Rivera FJ; Hemann MT

Jan 1, 2026Science advances

2026PubMedDirectly related

Single-cell Genomic Analysis of Fiber-adhering Rumen Bacteria during an in situ Incubation of Timothy Hay.

Takizawa S; Fujimori M; Shinkai T

Jan 1, 2026Microbes and environments

2026PubMedDirectly related

Integrative Bulk, Single-Cell, and Spatial Transcriptomic Analyses Nominate PPARG as a Candidate Senescence-Related Prognostic Gene in Osteosarcoma.

Li Y; Qin W; Liang T; Qiu R; Zhang Z

Jan 1, 2026Journal of visualized experiments : JoVE

2026PubMedDirectly related

Constructing cell-type-specific gene regulatory networks from cell-cell communication and a global gene regulatory network.

Xie Y; Fu B; Zhong L; Wu L; Li H; Chang X; Liu X

Jan 1, 2026Briefings in bioinformatics

2026PubMedDirectly related

AI-driven genotype-phenotype modeling: a framework integrating multi-modal single-cell genomics and reverse vaccinology for de novo design of multi-epitope cancer vaccines.

Mallik M; Mollick SA

Jan 1, 2026Frontiers in genetics

2026PubMedDirectly related

AI-driven genotype-phenotype modeling: a framework integrating multi-modal single-cell genomics and reverse vaccinology for de novo design of multi-epitope cancer vaccines.

Mallik M; Mollick SA

Jan 1, 2026Frontiers in genetics

2026PubMedDirectly related

Integrated Multi-Omics Analyses Identify TYMP as a Candidate Protective Immunoregulatory Marker in CD4⁺ T Cells During Sepsis.

Wang Y; Zhao J; Zhang Y; Shen J; Shi Y; Liu Q; Zhang X

Jan 1, 2026Journal of inflammation research