Single-Cell Genomics — Research Evidence and Topic Memory

Evidence

Public papers linked to this topic and used as evidence for gaps, timelines, and knowledge views.

211 papers

Showing 169-180 of total 211 evidence records.

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2021OpenAlexSupporting evidence137 citations

Zhijian Li; Christoph Kuppe; Susanne Ziegler; Mingbo Cheng; Nazanin Kabgani; Sylvia Menzel; Martin Zenke; Rafael Kramann; Ivan G. Costa

Nov 4, 2021Nature Communications

2021OpenAlexDirectly related219 citations

DISCO: a database of Deeply Integrated human Single-Cell Omics data

Mengwei Li; Xiaomeng Zhang; Kok Siong Ang; Jingjing Ling; Raman Sethi; Nicole Yee Shin Lee; Florent Ginhoux; Jinmiao Chen

Oct 13, 2021Nucleic Acids Research

2021CrossrefSupporting evidence22 citations

Enhancing Our Understanding of Plant Cell-to-Cell Interactions Using Single-Cell Omics

Sandra Thibivilliers; Marc Libault

Aug 5, 2021Frontiers in Plant Science

2021OpenAlexSupporting evidence127 citations

scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics

Qianqian Song; Jing Su; Wei Zhang

Jun 22, 2021Nature Communications

2021OpenAlexSupporting evidence17K citations

Integrated analysis of multimodal single-cell data

Yuhan Hao; Stephanie Hao; Erica Andersen‐Nissen; William M. Mauck; Shiwei Zheng; Andrew Butler; Madeline J. Lee; Aaron J. Wilk; Charlotte A. Darby; Michael Zager; Paul Hoffman; Marlon Stoeckius; Efthymia Papalexi; Eleni P. Mimitou; Jaison Jain; Avi Srivastava; Tim Stuart; Lamar M. Fleming; Bertrand Z. Yeung; Angela J. Rogers; M. Juliana McElrath; Catherine A. Blish; Raphaël Gottardo; Peter Smibert; Rahul Satija

May 31, 2021Cell

2021OpenAlexDirectly related500 citations

Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

Yoshiharu Muto; Parker C. Wilson; Nicolas Ledru; Hao Wu; Henrik Dimke; Sushrut S. Waikar; Benjamin D. Humphreys

Apr 13, 2021Nature Communications

2021CrossrefDirectly related4 citations

Single-cell genomics to study developmental cell fate decisions in zebrafish

Roberto Moreno-Ayala; Jan Philipp Junker

Mar 30, 2021Briefings in Functional Genomics

2021OpenAlexSupporting evidence53 citations

simATAC: a single-cell ATAC-seq simulation framework

Zeinab Navidi; Lin Zhang; Bo Wang

Mar 4, 2021Genome biology

2021OpenAlexDirectly related497 citations

Comprehensive analysis of single cell ATAC-seq data with SnapATAC

Rongxin Fang; Sebastian Preißl; Yang Li; Xiaomeng Hou; Jacinta Lucero; Xinxin Wang; Amir Motamedi; Andrew K. Shiau; Xinzhu Zhou; Fangming Xie; Eran A. Mukamel; Kai Zhang; Yanxiao Zhang; M. Margarita Behrens; Joseph R. Ecker; Bing Ren

Feb 26, 2021Nature Communications

2021OpenAlexDirectly related125 citations

Integrative analyses of scRNA-seq and scATAC-seq reveal CXCL14 as a key regulator of lymph node metastasis in breast cancer

Kun Xu; Wenwen Zhang; Cong Wang; Longfei Hu; Runtian Wang; Cenzhu Wang; Lin Tang; Guohua Zhou; Bingjie Zou; Hui Xie; Jinhai Tang; Xiaoxiang Guan

Feb 4, 2021Human Molecular Genetics

2021OpenAlexSupporting evidence811 citations

SPOTlight: seeded NMF regression to deconvolute spatial transcriptomics spots with single-cell transcriptomes

Marc Elosua-Bayés; Paula Nieto; Elisabetta Mereu; Marta Gut; Holger Heyn

Jan 15, 2021Nucleic Acids Research

2021OpenAlexDirectly related872 citations

scMC learns biological variation through the alignment of multiple single-cell genomics datasets

Lihua Zhang; Qing Nie

Jan 4, 2021Genome biology