Single-Cell Genomics

Genetics & GenomicsUpdated Oct 5, 2026Version v1

Evidence

Public papers linked to this topic and used as evidence for gaps, timelines, and knowledge views.

211 papers

Showing 193-204 of total 211 evidence records.

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2019OpenAlexDirectly related121 citations

Microfluidic Single‐Cell Omics Analysis

Xing Xu; Junxia Wang; Lingling Wu; Jingjing Guo; Yanling Song; Tian Tian; Wei Wang; Zhi Zhu; Chaoyong Yang

Sep 23, 2019Small

2019OpenAlexSupporting evidence705 citations

A comparison of automatic cell identification methods for single-cell RNA sequencing data

Tamim Abdelaal; Lieke Michielsen; Davy Cats; Dylan Hoogduin; Hailiang Mei; Marcel Reinders; Ahmed Mahfouz

Sep 9, 2019Genome biology

2019OpenAlexDirectly related1,049 citations

Single-cell genomics identifies cell type–specific molecular changes in autism

Dmitry Velmeshev; Lucas Schirmer; Diane Jung; Maximilian Haeussler; Yonatan Perez; Simone Mayer; Aparna Bhaduri; Nitasha Goyal; David H. Rowitch; Arnold R. Kriegstein

May 16, 2019Science

2019OpenAlexSupporting evidence1,244 citations

EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data

participants in the 1st Human Cell Atlas Jamboree; Aaron T. L. Lun; Samantha J. Riesenfeld; Tallulah Andrews; The Phuong Dao; Tomás Gomes; John C. Marioni

Mar 22, 2019Genome biology

2019OpenAlexSupporting evidence1,735 citations

PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data

Oscar Franzén; Li‐Ming Gan; Johan Björkegren

Jan 1, 2019Database

2018OpenAlexDirectly related1,186 citations

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Marlon Stoeckius; Shiwei Zheng; Brian Houck‐Loomis; Stephanie Hao; Bertrand Z. Yeung; William M. Mauck; Peter Smibert; Rahul Satija

Dec 1, 2018Genome biology

2018OpenAlexSupporting evidence1,688 citations

Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

Sonya A. MacParland; Jeff C. Liu; Xue‐Zhong Ma; Brendan T. Innes; Agata Bartczak; Blair K. Gage; Justin Manuel; Nicholas Khuu; Juan Echeverri; Ivan Linares; Rahul Gupta; Michael Cheng; Lewis Liu; Damra Camat; Sai Chung; Rebecca K. Seliga; Zigong Shao; Elizabeth Lee; Shinichiro Ogawa; Mina Ogawa; Michael D. Wilson; Jason E. Fish; Markus Selzner; Anand Ghanekar; David Grant; Paul D. Greig; Gonzalo Sapisochín; Nazia Selzner; Neil Winegarden; Oyedele Adeyi; Gordon Keller; Gary D. Bader; Ian D. McGilvray

Oct 16, 2018Nature Communications

2018OpenAlexDirectly related83 citations

Classifying cells with Scasat, a single-cell ATAC-seq analysis tool

Syed Murtuza Baker; Connor Rogerson; Andrew Hayes; Andrew D Sharrocks; Magnus Rattray

Oct 4, 2018Nucleic Acids Research

2018CrossrefSupporting evidence27 citations

Creating Lineage Trajectory Maps Via Integration of Single‐Cell RNA‐Sequencing and Lineage Tracing

Russell B. Fletcher; Diya Das; John Ngai

Aug 1, 2018BioEssays

2018OpenAlexSupporting evidence1,928 citations

Single-cell RNA sequencing technologies and bioinformatics pipelines

Byungjin Hwang; Ji Hyun Lee; Duhee Bang

Aug 1, 2018Experimental & Molecular Medicine

2018CrossrefDirectly related34 citations

Single-Cell Genomic Analysis in Plants

Yuxuan Yuan; HueyTyng Lee; Haifei Hu; Armin Scheben; David Edwards

Jan 22, 2018Genes

2017OpenAlexDirectly related260 citations

Mapping gene regulatory networks from single-cell omics data

Mark Fiers; Liesbeth Minnoye; Sara Aibar; Carmen Bravo González‐Blas; Zeynep Kalender Atak; Stein Aerts

Dec 26, 2017Briefings in Functional Genomics